PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_014028-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family C2H2
Protein Properties Length: 300aa    MW: 31985.4 Da    PI: 6.8351
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_014028-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.80.0016130152123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    y+C+ C+++F++   L  H  +H
  NNU_014028-RA 130 YECKTCNRCFPSFQALGGHRASH 152
                    99**********99999998887 PP

2zf-C2H213.70.00019206228123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++C++Cg  Fs+   L  H+r+H
  NNU_014028-RA 206 HECSICGSEFSSGQALGGHMRRH 228
                    78********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139122.1E-11129154IPR007087Zinc finger, C2H2
SuperFamilySSF576671.64E-8129152No hitNo description
PROSITE profilePS5015710.367130157IPR007087Zinc finger, C2H2
SMARTSM003550.14130152IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280132152IPR007087Zinc finger, C2H2
SuperFamilySSF576671.64E-8201228No hitNo description
PfamPF139125.4E-12205230IPR007087Zinc finger, C2H2
SMARTSM003550.02206228IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.097206233IPR007087Zinc finger, C2H2
PROSITE patternPS000280208228IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MEVAEEVVGS NDQHSTHVVK GKRTKRQRPP SPFSAVAMAT SSSSGGGGGD GGAGGGDDGA  60
FHSPTTSAEF AESTEEEEDM ANCLILLAQG HSRDSPKRIE EGGGMEMRIS SRRFAEAATT  120
TSGKGGFYVY ECKTCNRCFP SFQALGGHRA SHKKPKAMAA EEKKALMVSS PEEDEAQFNN  180
VNSSPHLHLQ IAGNKASVYG NKSRVHECSI CGSEFSSGQA LGGHMRRHRS APTTATTITT  240
SPDSPEAKKP RTTNVLSLDL DLNLPAPTED VDHREPKFPF SSKQQPSLLF SASALVDCHY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010267264.10.0PREDICTED: zinc finger protein ZAT5
TrEMBLA0A061FP508e-91A0A061FP50_THECC; C2H2-type zinc finger family protein, putative
STRINGVIT_06s0061g00760.t013e-87(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.16e-49C2H2 family protein